BacteriaBasedModels.jl

Agent-based modelling of bacterial motility and chemotaxis.

Package features

• Simulate bacterial motility in 1, 2 and 3 dimensions with customizable

motile patterns

• Simulate chemotaxis with different tunable models (currently implemented

Brown-Berg, Brumley)

• Evaluate quantity of interest (mean-squared displacement,

autocorrelation functions...)